Publications

Roeder Lab Journal Covers

cover_roeder_2010.jpg DevelopmentCover
PLoS Biology (May 2010) Development (Dec. 2012)
MorphoGraphX eLife (May 2015) Plant Physiology cover Dec 2015 Developmental Cell (July 2016)
MorphoGraphX eLife (May 2015) Plant Physiology (Dec. 2015) Developmental Cell (July 2016)
Molecular Plant (April 2017)
eLife (March 2017) Molecular Plant (April 2017)

Publications

2017

Hong Lilan, Brown Joel, Segerson Nicholas A., Rose Jocelyn K.C., & Roeder Adrienne H.K. CUTIN SYNTHASE 2 Maintains Progressively Developing Cuticular Ridges in Arabidopsis Sepals Molecular Plant (2017) 

Meyer Heather M., Teles José, Formosa-Jordan Pau, Refahi Yassin, San-Bento Rita, Ingram Gwyneth, Jönsson Henrik, Locke James C. W., & Roeder Adrienne H.K. Fluctuations of the transcription factor ATML1 generate the pattern of giant cells in the Arabidopsis sepal eLife (2017) 

Hong Lilan & Roeder Adrienne H.K. Plant Development: Differential Growth Rates in Distinct Zones Shape an Ancient Plant Form Current Biology (2017) 

2016

Schwarz Erich M. & Roeder Adrienne H.K. Transcriptomic Effects of the Cell Cycle Regulator LGO in Arabidopsis Sepals Frontiers in Plant Science (2016)

Hong Lilan, Dumond Mathilde, Tsugawa Satoru, Sapala Aleksandra, Routier-Kierzkowska Anne-Lise, Zhou Yong, Chen Catherine, Kiss Annamaria, Zhu Mingyuan, Hamant Olivier, Smith Richard S., Komatsuzaki Tamiki, Li Chun-Biu, Boudaoud Arezki, & Roeder Adrienne H.K. Variable Cell Growth Yields Reproducible Organ Development through Spatiotemporal Averaging Developmental Cell (2016) 

Hervieux Nathan, Dumond Mathilde, Sapala Aleksandra, Routier-Kierzkowska Anne-Lise, Kierzkowski Daniel, Roeder Adrienne H.K., Smith Richard S., Boudaoud Arezki, & Hamant Olivier A Mechanical Feedback Restricts Sepal Growth and Shape in Arabidopsis. Current Biology. (2016) 

Gillmor C. Stewart, Roeder Adrienne H. K., Sieber Patrick, Somerville Chris, & Lukowitz Wolfgang A genetic screen for mutations affecting cell division in the Arabidopsis thaliana embryo identifies seven loci required for cytokinesis. PLoS One. (2016) 

2015

Tauriello Gerardo, Meyer Heather M., Smith Richard S., Koumoutsakos Petros & Roeder Adrienne H.K. Variability and constancy in cellular growth of Arabidopsis sepals. Plant Physiol. (2015)

Barbier de Reuille P, Routier-Kierzkowska A, Kierzkowski D, Bassel GW, Schupach T, Tauriello G, Bajpai N, Strauss S, Weber A, Kiss A, Burian A, Hofhuis H, Sapala A, Lipowczan M, Heimlicher M, Robinson S, Bayer E, Basler K, Koumoutsakos P, Roeder AHK, Aegerter-Wilmsen T, Nakayama N, Tsiantis M, Hay A, Kwiatkowska D, Xenarios I, Kuhlemeier C, Smith RS. MorphoGraphX: A platform for quantifying morphogenesis in 4D. eLife. (2015)

Robinson Dana Olivia & Roeder Adrienne H.K. Themes and variations in cell type patterning in the plant epidermis. Current Opinion in Genetics and Development. (2015)

2014

Qu X, Chatty PR, Roeder AH. Endomembrane trafficking protein SEC24A regulates cell size patterning in Arabidopsis thaliana. Plant Physiol. (2014)

Meyer HM, Roeder AHK.  Stochasticity in plant cellular growth and patterning. Front. Plant Sci. (2014) 

2013

Fick RHJ , Fedorov D, Roeder AHK, and Manjunath BS. Simultaneous cell tracking and image alignment in 3D CLSM imagery of growing Arabidopsis thaliana sepals. (ISBI), 2013 IEEE 10th International Symposiumon Biomedical Imaging

2012

Marshall WF, Young KD, Swaffer M, Wood E, Nurse P, Kimura A, Franke J, Wallingford J, Walbot V, Qu X and Roeder AHK. What determines cell size? BMC Biology (2012)

Roeder AHK, Cunha A, Ohno CK, Meyerowitz EM. Cell cycle regulates cell type in the Arabidopsis sepalDevelopment (2012)

Roeder AHK, Cunha A, Burl MC, Meyerowitz EM. A computational image analysis glossary for biologistsDevelopment (2012)

Roeder, AHK When and where plant cells divide: a perspective from computational modeling.Current Opinion in Plant Biology. 15:638–644 (2012)

Cunha A, Tar, PT, Roeder, AHK, Altinok A, Mjolsness E, Meyerowitz EM Computational Analysis of Live Cell Images of the Arabidopsis thaliana Plant. Methods in Cell Biology: Computational Methods in Cell Biology 110, 285-323 (2012)

Shapiro, BE, Jönsson, H, Sahlin, P, Heisler, M Roeder, AHK, Burl, M, Meyerowitz, EM, Mjolsness ED Tessellations and Pattern Formation in Plant Growth and Development Tessellations in the Sciences: Virtues, Techniques and Applications of Geometric Tilings Springer Verlag (2012)

2011

Ripoll JJ, Roeder, AHK, Ditta GS, Yanofsky MF A novel role for the floral homeotic gene APETALA2 during Arabidopsis fruit development. Development 138, 5167-5176 (2011)

Roeder, AHK, Tarr, PT, Tobin C, Zhang X, Chickarmane V, Cunha A, Meyerowitz, EM Computational Morphodynamics: integrating development over space and time. Nature Reviews Molecular Cell Biology 12, 265-273 (2011)

2010

Jun J, Fiume E, Roeder AHK, Meng L, Sharma VK, Osmont KS, Bake, C, Ha CM, Meyerowitz EM, Feldman LJ, Fletcher JC Comprehensive analysis ofCLE polypeptide signaling gene expression and over-expression activity in Arabidopsis. Plant Physiology 154, 1721-1736 (2010)

Roeder AHK, Chickarmane V*, Cunha A, Obara B, Manjunath BS, Meyerowitz EM Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana. PLoS Biology 8, e1000367. doi:1000310.1001371/journal.pbio.1000367 (2010)

Roeder AHK Sepals. In: Encyclopedia of Life Sciences (ELS). John Wiley & Sons, Ltd: Chichester. DOI: 10.1002/9780470015902.a0002064.pub2 (2010)

Chickarmane V, Roeder AHK, Tarr PT, Cunha A, Tobin C, Meyerowitz EM Computational Morphodynamics: A Modeling Framework to Understand Plant Growth. Annual Review of Plant Biology 61, 65–87 (2010)

Cunha A, Roeder AHK, Meyerowitz EM Segmenting the Sepal and Shoot Apical Meristem of Arabidopsis thaliana32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC’10). Buenos Aires, Argentina, September 1-4 2010.

2009

Harrison CJ, Roeder AHK, Meyerowitz EM, Langdale JA Local Cues and Asymmetric Cell Divisions Underpin Body Plan Transitions in the Moss Physcomitrella patens. Current Biology 19, 461-471 (2009)

2006

Burl M, Roeder AHK, Ohno C, Mjolsness E, Meyerowitz EM (2006). Automatic Extraction of 3D Nuclear Bounding Surfaces from CLSM Imagery of Developing Arabidopsis Flowers, Workshop on Multiscale Biological Imaging, Data Mining and Bioinformatics. University of California, Santa Barbara, CA, USA, Sept 7-8, 2006.

2005

Yu Q, Moore PH, Albert HH, Roeder AHK, Ming R Cloning and characterization of a FLORICULA/LEAFY ortholog, PFL, in polygamous papaya. Cell Research 15, 576-584 (2005)

Roeder AHK, Yanofsky MF Fruit Development in Arabidopsis. The Arabidopsis Book, eds. C.R. Somerville and E.M. Meyerowitz, American Society of Plant Biologists, Rockville, MD. (2005)

2004

Lukowitz W, Roeder AHK, Parametre D, Somerville C. A MAPKK kinase gene regulates extra-embryonic cell-fate in Arabidopsis. Cell 116, 109-119 (2004)

Liljegren SJ, Roeder AHK, Kempin SA, Gremski K, Østergaard L, Guimil S, Reyes D K, Yanofsky MF Control of fruit patterning in Arabidopsis byINDEHISCENT. Cell 116, 843-853 (2004)

2003

Roeder AHK, Ferrándiz C, Yanofsky MF The role of the REPLUMLESS homeodomain protein in patterning the Arabidopsis fruit. Current Biology 13, 1630-1635  (2003)

2001

Roeder AHK, Yanofsky MF Unraveling the mystery of double flowers. Developmental Cell 1,4-6 (2001)  

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